Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868073.1_cds_XP_016433354.1_29522
CDS Infomation

[gene=LOC107759855] [db_xref=GeneID:107759855] [protein=pentatricopeptide repeat-containing protein ELI1, chloroplastic-like] [protein_id=XP_016433354.1] [location=complement(join(84083..84294,84604..85624))] [gbkey=CDS]
Sequence

ATGTATGTCGCCACCTCTATGCTTAATGCGTATGCTGGAACCTCGTTTGACTGTGCATAC
AAGCTGTTCGATGAAATTCCCGTGAGAAATACTGTCACGTCGAACTCGGTGATATCTTGC
TTTTCTCGTTCCGGAGATGTTAAAGGAACGAGAAAGATGTTCGATCAGATGCCTTTGAGA
GACCTAGCTTCGTGGTCGGCAATGATTGCTGGATACATGAACAATGGGCATTGGGAGGAA
GGTGCGGCGCTCTTCCAAGAAATGGTTATTTTTGAACAACTAAAGCTTGATCAAGTGACC
ATTGGGCCAATATTGGCGGGCTGTTCTGAAATTTGTTCAATTGGTTTGCTCCTTGGGAAA
TCAGTGCATGGTTTTGTCGTGAAGAATCACTTGGAACTAAATGTGGAGCTTGGTACTTGT
TTAGTAGACATGTATGCTAAATGTGGATTCATGAATTTTGCTTCTCTGGTTTTCGATATG
ATGAAAGATAGAAATGTTGTTACTTGGACTGCTTTAATTTGTGGAGCAGCAAAACATGGT
TTTGGAACTGAATCGTTGAAGATATTCAAGAAAATGAGACAAGGGGGTGTGCTACCTAAT
GAGTTTACGTTCACTGGGGTACTTTGTGCTTCTGTACAAGCAGGGCTGGTCAATGAAGGT
CGTGGATATTTCAAAATGACCAAAGAGTGTGGACTGAGACCAACAATTCAGCATTGTGGC
TGCATGGTTGAGTTATTTGGGAAGGCTGGGTTGTTAGGGGAAGCATATGAAGTTATCAAT
ACTATGTCACCCGAGCCTATCATAGTTATTTGGGGTTCCTTTTTGTCATCTTGCAAGTTG
CATAAACAGTTTGAGATGGCAGAGCGAGTGATTGAGATGGTCATTAATGTGGTGAGGCCA
GAGAATGATGGAGGGGTTTATACCCTTATCTCAGACTTGTATGTTCTGGGTGATAAATGG
GCGGAAGCCGAGAGGGTGAGGCAGTTGATGCTCCATCAACATGTGCGGAAAGCTAGAGGA
TCTAAGCCTTTGGGTCAACGTGTTGGTAATTCAGAGGACTGGGATTCAATTTGCCTGAAG
TTTCCTCATCCTGGTTATCAGGTAATTCTCTTTGCTTCTTCTCTTCATCCCTTGACTGTG
TTTTATGTCTATGATCTCCTACAAGTAGCCGGATTTTTGGTGGGCTGTGTGTGTGACAGA
GACAGAGCGAGAGAGAGGGTAGTTGAAGGTTGA

Peptide Sequence

PEP ID

XP_016433354.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein ELI1, chloroplastic-like [Nicotiana tabacum]
Sequence

MYVATSMLNAYAGTSFDCAYKLFDEIPVRNTVTSNSVISCFSRSGDVKGTRKMFDQMPLR
DLASWSAMIAGYMNNGHWEEGAALFQEMVIFEQLKLDQVTIGPILAGCSEICSIGLLLGK
SVHGFVVKNHLELNVELGTCLVDMYAKCGFMNFASLVFDMMKDRNVVTWTALICGAAKHG
FGTESLKIFKKMRQGGVLPNEFTFTGVLCASVQAGLVNEGRGYFKMTKECGLRPTIQHCG
CMVELFGKAGLLGEAYEVINTMSPEPIIVIWGSFLSSCKLHKQFEMAERVIEMVINVVRP
ENDGGVYTLISDLYVLGDKWAEAERVRQLMLHQHVRKARGSKPLGQRVGNSEDWDSICLK
FPHPGYQVILFASSLHPLTVFYVYDLLQVAGFLVGCVCDRDRARERVVEG

Transcript Sequence

Gene sequence data has not been registered.